Epigenetic Regulation of ABCB1 Expression in Triple Negative Breast Cancer and its Impact on Taxane Resistance
- Authors
-
-
Sunil Kumar Yadav
Kalinga University, Naya Raipur, Chhattisgarh, India -
Brijmohan Singh
Kalinga University, Naya Raipur, Chhattisgarh, India
-
- Keywords:
- Triple-negative breast cancer, taxane resistance, ABCB1, epigenetics, DNA methylation, histone acetylation, miRNA, chemotherapy resistance, epigenetic inhibitors
- Abstract
-
Objective: This research was conducted to examine the part played by epigenetic regulation in up-regulating the expression of ABCB1 (P-glycoprotein) and the role it contributes to the development of taxane resistance in triple-negative breast cancer (TNBC).
Methods: Taxane-sensitive and taxane-resistant TNBC cell lines (e.g., MDA-MB-231) were subjected to the evaluation of the ABCB1 expression with the help of the quantitative PCR (qPCR) and the Western blotting procedures. Bisulfite sequencing, chromatin immunoprecipitation (ChIP), and miRNA profiling were used to study epigenetic alterations such as DNA methylation, changes in histone activity (acetylation), and miRNAs, respectively. To test the reversal of resistance, epigenetic inhibitors were utilized and included 5-aza-2'-deoxycytidine and trichostatin A. Patient-derived TNBC samples were used to make clinical correlations that established the connection between the status of ABCB1 methylation and the response to chemotherapy.
Findings: The expression of ABCB1 in taxane-resistant cells was found to be much higher in comparison to that of sensitive cells, as determined by both mRNA and protein. The DNA analysis of the methylation of the promoter of the ABCB1 showed that it is hypomethylated in the resistant cells, and the histone acetylation of ABCB1 was also significantly elevated in the resistant cells. miR-451 and miR-335, which regulate ABCB1, were suppressed in the resistant cells. ABCB1 overexpression was reversed by treatment with epigenetic inhibitors, and sensitivity to taxanes was restored. It was found that low levels of methylation of the promoter of ABCB1 were linked to ineffective taxane chemotherapy response in patients with TNBC.
Conclusion: Taxane resistance in TNBC occurs with the help of epigenetic regulation of ABCB1. The significant contributors to the overexpression of ABCB1 are DNA hypomethylation, histone acetylation, and miRNA dysregulation. Epigenetic therapies, as an adjunct to the taxane chemotherapy, are one such promising approach that could be used to overcome drug resistance in TNBC, and they should be further explored in clinical trials.
- Downloads
-
Download data is not yet available.
- References
-
[1] Cevatemre B, Bulut I, Dedeoglu B, Isiklar A, Syed H, Bayram OY, Acilan C. Exploiting epigenetic targets to overcome taxane resistance in prostate cancer. Cell Death & Disease 2024; 15(2): 132.
[2] Yedier-Bayram O, Cingöz A, Yilmaz E, Aksu AC, Esin B, Degirmenci N, Bagci-Onder T. Chromatin-focused genetic and chemical screens identify BRPF1 as a targetable vulnerability in Taxol-resistant triple-negative breast cancer. Experimental & Molecular Medicine 2025; 57(6): 1294-1307.
[3] Zappe K, Cichna-Markl M. Aberrant DNA methylation of ABC transporters in cancer. Cells 2020; 9(10): 2281.
[4] Ferrari P, Scatena C, Ghilli M, Bargagna I, Lorenzini G, Nicolini A. Molecular mechanisms, biomarkers and emerging therapies for chemotherapy resistant TNBC. International Journal of Molecular Sciences 2022; 23(3): 1665.
[5] Das S, Ghosh S, Hansda S. Epigenetic Regulation in Chemotherapy Resistance of Breast Cancer: Role of Chromatin Modifications and Non-Coding RNAs in Chemotherapeutic Resistance. Diseases & Research 2025; 5(4): 199-216.
[6] Gronkowska K, Kołacz-Milewska K, Skoczylas S, Nagy É, Jacenik D, Székvölgyi L, Strachowska M. SMARCA1 regulates PARP1-dependent ABC transporters expression and mediates doxorubicin resistance in triple-negative breast cancer. Biomedicine & Pharmacotherapy 2025; 192: 118698.
[7] Ray SK, Mukherjee S. Epigenetic reprogramming and landscape of transcriptomic interactions: Impending therapeutic interference of triple-negative breast cancer in molecular medicine. Current Molecular Medicine 2022; 22(10): 835-850.
[8] Chen H, Zhang M, Deng Y. Long noncoding RNAs in Taxane resistance of breast cancer. International Journal of Molecular Sciences 2023; 24(15): 12253.
[9] Lee J, Kwon Y. Topoisomerase Inhibitor Resistance in Breast Cancer: Exploring Alterations in Cellular Metabolism and Properties Driving Drug Insensitivity. Drug Targets and Therapeutics 2025; 4(2): 185-209.
[10] Saha S, Mahapatra S, Khanra S, Mishra B, Swain B, Malhotra D, Kundu GC. Decoding breast cancer treatment resistance through genetic, epigenetic, and immune-regulatory mechanisms: from molecular insights to translational perspectives. Cancer Drug Resistance 2025; 8: 36.
[11] Modi A, Roy D, Sharma S, Vishnoi JR, Pareek P, Elhence P, Purohit P. ABC transporters in breast cancer: their roles in multidrug resistance and beyond. Journal of Drug Targeting 2022; 30(9): 927-947.
[12] Tsyganov MM, Ibragimova MK, Gaptulbarova KA, Tsydenova IA, Dolgasheva DS, Garbukov EY, Litvyakov NV. DNA Copy number aberrations and expression of ABC transporter genes in breast tumour: correlation with the effect of neoadjuvant chemotherapy and prognosis of the disease. Pharmaceutics 2022; 14(5): 948.
[13] Lopez-Camacho E, Trilla-Fuertes L, Gamez-Pozo A, Dapía I, Lopez-Vacas R, Zapater-Moros A, Espinosa E. Synergistic effect of antimetabolic and chemotherapy drugs in triple-negative breast cancer. Biomedicine & Pharmacotherapy 2022; 149: 112844.
[14] Modi A, Roy D, Sharma S, Vishnoi JR, Pareek P, Elhence P, Purohit P. ABC transporters in breast cancer: their roles in multidrug resistance and beyond. Journal of Drug Targeting 2022; 30(9): 927-97.
[15] Karami Fath M, Azargoonjahromi A, Kiani A, Jalalifar F, Osati P, Akbari Oryani M, Payandeh Z. The role of epigenetic modifications in drug resistance and treatment of breast cancer. Cellular & Molecular Biology Letters 2022; 27(1): 52.
[16] Cai WY, Cai XX, Fei YR, Ye R, Song DM, Hu D, Yang XX. DNA methylation and immune evasion in triple-negative breast cancer: challenges and therapeutic opportunities. Frontiers in Oncology 2025; 15: 1534055.
[17] Błaszczak E, Miziak P, Odrzywolski A, Baran M, Gumbarewicz E, Stepulak A. Triple-negative breast cancer progression and drug resistance in the context of epithelial–mesenchymal transition. Cancers 2025; 17(2): 228.
[18] Barhela K, Chaudhary AA, Mishra R, Nupur N, Magani SKJ, Rudayni HA, Kumar B. Interplay between Epigenetic and Transcription Factors Mediating Drug Resistance via Stem Cells in Breast Cancer. ACS Omega 2025; 10(50): 61140-61158.
[19] Kordias D, Kostara CE, Papadaki S, Verigos J, Bairaktari E, Magklara A. Omics analysis of chemoresistant triple negative breast cancer cells reveals novel metabolic vulnerabilities. Cells 2022; 11(17): 2719.
[20] Ebrahimi A, Shahrebabaki PB, Fouladi H, Derakhshan SM. The impact of microRNAs on the resistance of breast cancer subtypes to chemotherapy. Pathology-Research and Practice 2023; 249: 154702.
- Downloads
- Published
- 12-06-2026
- Issue
- Vol. 15 No. 1 (2026)
- Section
- Articles
- License
-

This work is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License.
How to Cite
Similar Articles
- Pravin K. Naoghare, Ajam Shekh, Amit Bafana, Kannan Krishnamurthi, Saravanadevi Sivanesan, Unveiling the Unpredicted and Uncontrolled Metastasis of Cancer Cells: A Minireview , Journal of Cancer Research Updates: Vol. 5 No. 3 (2016)
- Kaiguo Yan, Laura Doyle, Haisong Liu, Pramila Rani Anne, Amy Harrison, Yan Yu, Junsheng Cao, Template-Based Inverse PlanningSimulated Annealing for CT-Based High-Dose-Rate Brachytherapy of Cervical Cancer: Feasibility Study , Journal of Cancer Research Updates: Vol. 2 No. 1 (2013)
- Willy Ramos, Víctor Juan Vera-Ponce, Rubén Espinoza, Nadia Guerrero, Zoila Moreno Garrido, Fiorella E. Zuzunaga-Montoya, Ericson L. Gutierrez, Non-Performance of Cancer Screening in Peru: A Comparative Analysis between Regions Exposed and Unexposed to Ozone Layer Mini-Hole , Journal of Cancer Research Updates: Vol. 14 (2025)
- Joseph V. Pergolizzi Jr, Robert Taylor Jr, Gianpietro Zampogna, Fuat H. Demirelli, Serdar Erdine, Robert B. Raffa, Oxycodone Immediate Release for Cancer Pain Management in Turkey: Maximizing Value in Opioid Analgesics , Journal of Cancer Research Updates: Vol. 3 No. 4 (2014)
- Joseph V. Pergolizzi, Gianpietro Zampogna, Robert Taylor, Marixa Guerrero, Juan Quillermo Santacruz, Robert B. Raffa, A Guide for Pain Management in Developing Nations: The Diagnosis and Assessment of Pain in Cancer Patients , Journal of Cancer Research Updates: Vol. 5 No. 1 (2016)
- Keishla M. García, Karla M. Flores, Adriana Falcón, Charlynne De Jesus, Loida Del Rio, Laura C. Rivera, Michelle Marquez, Santos Ortiz, Gretchen Sandoval, Alejandro Ruiz, Fabiola Rodriguez, Frances Gonzalez, Kenneth Cintron, Miguel J. Berdiel, Jorge Duconge, Maricelly Santiago, Ines Alfaro, Michael J. Gonzalez, Perioperative Effects of Surgery, Anesthesia and Analgesics Associated with Cancer Progression: A Review , Journal of Cancer Research Updates: Vol. 7 No. 1 (2018)
- César Paz-y-Miño, Carolina Salazar, Tania Zurita, Andrés López-Cortés, Ramiro Hidalgo, Felipe Rosales, Alexandra Montalvo, Paola E. Leone, Positive Association between the Polymorphic Variant CCND1 A870G and Colorectal Cancer in Ecuadorian Mestizo Population , Journal of Cancer Research Updates: Vol. 4 No. 4 (2015)
- Kawakeb N. Abdulla, Rasha Kareem Khudhur, Ali Muafaq Said, Azal Hamoody Jumaa, Youssef Shakuri Yasin, Laetrile and Methotrexate: A Dual-Drug Approach to Inhibiting Cervical Cancer Cell Proliferation , Journal of Cancer Research Updates: Vol. 14 (2025)
- Fatma F. Abdel Hamid, Mahmoud K. Singer, Mahmoud N. El-Rouby, Mahmoud M. Said, Reda H. Tabashy, Motawa E. El-Houseini, HepG2 Attenuation Induced by RNase A Modulates Gene Profiling and Immunophenotypic Characterization of Some Immune Cells Operating in Cancer Vaccine , Journal of Cancer Research Updates: Vol. 7 No. 1 (2018)
- Michael T. Hardin, Amy S. Harrison, Virginia L. Lockamy, Jun Li, Cheng Peng, Peter Potrebko, Yan Yu, Laura Doyle, Junsheng Cao, Evaluation of the Type and Frequency of Errors Discovered During Routine Secondary Patient Chart Review , Journal of Cancer Research Updates: Vol. 6 No. 1 (2017)
You may also start an advanced similarity search for this article.
